Department of Medicinal Chemistry and Molecular Pharmacology Personnel - Mark S. Cushman
Specialization: Medicinal Chemistry
EducationPharm. D. - 1969 - University of California Medical Center, San Francisco
Ph.D. - 1973 - University of California Medical Center, San Francisco
Postdoc - 1973-75 - Massachusetts Institute of Technology
Research: Medicinal Chemistry
Our research group is engaged in the design and synthesis of a variety of molecules that interact with specific enzymes and membrane-bound receptors. This effort involves the integration of basic concepts in organic reaction mechanisms, synthetic organic chemistry, structural biology, biochemistry, computational chemistry, and pharmacology. At the present time, potential anticancer agents and antibiotics are being designed, synthesized, and tested.
In the anticancer drug development area, team members are focusing on novel indenoisoquinoline inhibitors of topoisomerase I. Work in this area has led to the synthesis of indenoisoquinolines containing amine side chains that confer exceptional potency as topoisomerase I inhibitors and as cytotoxic agents in human cancer cell cultures. Two indenoisoquinoline topoisomerase I inhibitors (LMP400 and LMP776) synthesized by the Cushman group have entered phase I clinical trials for treatment of cancer patients at the National Cancer Institute, and definite plans are being formulated to commence phase II clinical trials. The results of these clinical trials have been very promising, with no "show stoppers" involving bad ADME properties, lack of effects on biomarkers, or severe toxicities. In fact, the shrinkage of lung nodules in one cancer patient with colon cancer metastasis that was unresponsive to an array of established anticancer drugs, including irinotecan, after only one course of treatment with LMP400, is very encouraging. Recent work on the indenoisoquinolines has focused on synthesizing dual inhibitors of topoisomerase I and tyrosyl-DNA phosphodiesterase I. Since topoisomerase I inhibitors cause DNA breaks and tyrosyl-DNA phosphodiesterase I is involved in repairing them, the dual inhibitors my act synergistically to produce very potent anticancer activity. Strategies are also being investigated that are intended to target indenoisoquinolines specifically to prostate cancer cells and not normal cells in order to minimize undesirable systemic toxicity and improve efficacy.
Aromatase inhibitors are widely used in the treatment of breast cancer. However, they have significant side effects, including reduction in bone density leading to increase incidence of fractures, severe musculoskeletal pain leading to reduced patient compliance, and increase frequency of cardiovascular events. These undesirable effects are thought to be due to global estrogen depletion directly resulting from inhibition of aromatase. Cushman's research group is presently synthesizing aromatase inhibitors that also bind to estrogen receptors in normal cells and are designed to produce estrogenic effects in non-tumor tissues. The overall goal of this project is to design and synthesize compounds that inhibit estrogen production, block estrogen receptors in breast cancer cells, and stimulate estrogen receptors in normal cells. This is expected to result in an anticancer drug that would effectively treat breast cancer while greatly improving the quality of the lives of patients undergoing breast cancer chemotherapy.
Cancer prevention obviously offers distinct advantages over cancer treatment. A number of receptors that are involved in carcinogenesis are therefore being targeted by the Cushman group, including quinone reductases 1 and 2, NFΚB, retinoid X receptor, inducible nitric oxide synthase, the estrogen receptor, cyclooxygenases 1 and 2, MAPKs (p38 and Jun N-terminal kinase), and p21.
Lab Members:Daniel Edward Beck (Graduate Student)
Mohamed S. A. El-Sayed (Graduate Student)
Wei Lv (Graduate Student)
Trung Xuan Nguyen (Graduate Student)
Elizaveta N. (Liza) O'Neill (Graduate Student)
Venkat Narasimha Reddy Puram (Post-Doctoral Research Associate)
Li Ming Zhao (Visiting Research Scholar)
R. Balana-Fouce, C. Prada, J. Requena, M. Cushman, Y. Pommier, R. Álvarez-Velilla, J. Escudero-Martínez, E. Calvo-Álvarez, Y. Pérez-Pertejo, and R. Reguera "Indotecan (LMP400) and AM13-55: Two Novel Indenoisoquinolines Show Potential for Treating Visceral Leishmaniasis", Antimicrob. Agents Chemother. 56, 5264-5270 (2012).
A. S. Mayhoub, L. Marler, T. P. Kondratyuk, E.-J. Park, J. M. Pezzuto, and M. Cushman§, "Optimization of Thiazole Analogues of Resveratrol for Induction of NAD(P)H:quinone Reductase 1 (QR1)," Bioorg. Med. Chem. 20, 7030-7039 (2012).
G. Mancini, I. D'Annessa, A. Coletta, G. Chillemi, Y. Pommier, M. Cushman, and A. Desideri, "Binding of an Indenoisoquinoline to the Topoisomerase-DNA Complex Induces Reduction of Linker Mobility and Strengthening of Protein-DNA Interaction," PloS ONE 7(12): e51354. doi:10.1371/journal.pone.0051354 (http://dx.plos.org/10.1371/journal.pone.0051354).
M. A. Cinelli, P. V. N. Reddy, P.-C. Lv, J.-H. Liang, L. Chen, K. Agama, Y. Pommier, R. B. van Breemen, and M. Cushman, "Identification, Synthesis, and Biological Evaluation of Metabolites of the Experimental Cancer Treatment Drugs Indotecan (LMP400) and Indimitecan (LMP 776) and Investigation of Isomerically Hydroxylated Indenoisoquinoline Analogues as Topoisomerase I Poisons," J. Med. Chem. 55, 10844-10862 (2012).
J.-H. Liang, K. An, W. Lv, M. Cushman, H. Wang, and Y.-C. Xu, "Synthesis, Antibacterial Activity and Docking of 14-Membered 9-O-(3-Arylalkyl)oxime 11,12-Cyclic Carbonate Ketolides," Eur. J. Med. Chem. 59, 54-63 (2013).
J.-H. Liang, W. Lv, X.-L. Li, K. An, M. Cushman, H. Wang, and Y.-C. Xu, "Synthesis and Antibacterial Activity of 9-Oxime Ether Non-ketolides, and Novel Binding Mode of Alkylides," Bioorg. Med. Chem. Lett. 23, 1387-1393 (2013).
M. Conda-Sheridan, P. V. Narasimha Reddy, A. Morrell, B. T. Cobb, C. Marchand, K. Agama, A. Chergui, A. Renaud, A. G. Stephen, L. K. Bindu, Y. Pommier, and M. Cushman, "Synthesis and Biological Evaluation of Indenoisoquinolines That Inhibit Both Tyrosyl-DNA Phosphodiesterase I (Tdp1) and Topoisomerase I (Top1)," J. Med. Chem. 56, 182-200 (2013).
D. Sun, J. G. Hurdle, R. Lee, R. Lee, M. Cushman, and J. M. Pezzuto, "Evaluation of Flavanoid and Resveratrol Chemical Libraries Reveals Abyssinone II as a Promising Antibacterial Lead," ChemMedChem 7, 1541-1545 (2012).
M. Conda-Sheridan, E.-J. Park, D. E. Beck, P. V. N. Reddy, T. X. Nguyen, B. Hu, L. Chen, J. L. White, R. B. van Breemen, J. M. Pezzuto, and M. Cushman, "Design, Synthesis, and Biological Evaluation of Indenoisoquinoline Rexinoids with Chemopreventive Potential," J. Med. Chem. 56, 2581-2605 (2013).
J.-H. Liang, W. Lv, X.-L. Li, K. An; M. Cushman, H. Wang, and Y.-C. Xu, " Synthesis and Antibacterial Activity of 9-Oxime Ether Non-ketolides, and Novel Binding Mode of Alkylides with Bacterial rRNA," Bioorg. Med. Chem. Lett. 23, 1387–1393 (2013).All publications for Mark S. Cushman (an Adobe Acrobat file)
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This record was last updated on Feb 18, 2014 at 10:08 AM